STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_2444ABC transporter related protein. (351 aa)    
Predicted Functional Partners:
FAES_2445
Secretion protein HlyD.
 
 0.983
FAES_2446
Outer membrane protein-like protein.
 
  
 0.921
FAES_2443
Transcriptional regulator, TetR family.
 
     0.868
FAES_0315
Hypothetical protein.
  
     0.656
FAES_3816
ABC transporter related protein.
 
 
 0.594
FAES_3132
ABC transporter related protein.
  
 
 0.575
FAES_0943
ABC transporter related protein.
  
 
 0.540
FAES_1030
ABC transporter related protein.
  
 
 0.540
FAES_2053
ABC transporter related protein.
  
 
 0.540
FAES_2084
ABC transporter related protein.
  
 
 0.540
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.