STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_2704Protein of unknown function DUF88. (344 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.638
FAES_0002
Hypothetical protein.
  
     0.624
pabB
Para-aminobenzoate synthetase component I.
       0.617
FAES_3156
Phosphodiesterase/alkaline phosphatase D.
  
     0.525
FAES_2585
Exonuclease RNase T and DNA polymerase III.
 
     0.492
FAES_4114
Hypothetical protein.
  
     0.467
FAES_3317
Xylose isomerase domain protein TIM barrel.
  
     0.455
FAES_3834
Hypothetical protein.
  
     0.435
FAES_4235
Putative transcriptional regulator, Crp/Fnr family.
  
 
   0.419
FAES_2702
Hypothetical protein.
       0.410
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.