STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_3545Muramoyltetrapeptide carboxypeptidase. (309 aa)    
Predicted Functional Partners:
dacB
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
 
  
 0.722
irk
Inward rectifier potassium channel 2 Potassium channel, inwardly rectifying subfamily J member 2.
       0.534
FAES_0201
N-acetylmuramoyl-L-alanine amidase.
    
 0.523
amiA1
N-acetylmuramoyl-L-alanine amidase.
    
 0.523
amiA3
N-acetylmuramoyl-L-alanine amidase.
    
 0.523
FAES_0864
Beta-N-acetylhexosaminidase.
   
 0.441
FAES_0196
Hypothetical protein.
  
     0.433
FAES_2253
Glycoside hydrolase family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
   
 0.403
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.