STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_3583TonB-dependent receptor. (822 aa)    
Predicted Functional Partners:
FAES_3582
Hypothetical protein.
       0.746
FAES_3381
Peptidase M28.
  
     0.572
bfeA
Ferric enterobactin receptor.
  
    0.552
FAES_2359
anti-FecI sigma factor, FecR.
  
    0.543
FAES_0294
TonB-dependent receptor plug.
  
    0.499
FAES_3584
Ferritin Dps family protein; Belongs to the Dps family.
 
     0.494
FAES_5419
Peptidase M28.
  
     0.492
FAES_2164
anti-FecI sigma factor, FecR.
  
    0.473
FAES_0045
TonB-dependent receptor.
  
    0.444
FAES_2397
anti-FecI sigma factor, FecR.
  
    0.441
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.