STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_3709Signal transduction histidine kinase. (692 aa)    
Predicted Functional Partners:
FAES_3708
Two component transcriptional regulator, LytTR family.
     0.909
FAES_4612
Putative transcriptional regulator.
 
     0.769
FAES_3013
Putative PAS/PAC sensor protein.
 
     0.767
FAES_4217
Two component transcriptional regulator, LytTR family.
 
     0.766
FAES_1873
ATP-binding region ATPase domain protein; Molecular chaperone. Has ATPase activity.
  
 0.635
FAES_4094
WD40 repeat, subgroup.
   
 0.616
FAES_4710
Nodulation protein V.
 
   
 0.615
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.606
FAES_3710
Histidine kinase.
  
 
 0.552
FAES_2216
Multi-sensor hybrid histidine kinase.
   
 
 0.481
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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