STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_3796Xylose isomerase domain protein TIM barrel. (292 aa)    
Predicted Functional Partners:
FAES_3317
Xylose isomerase domain protein TIM barrel.
  
  
  0.925
FAES_0508
Oxidoreductase domain protein.
   
 
  0.921
lolI
4-hydroxyphenylpyruvate dioxygenase.
     
  0.900
FAES_3798
Oxidoreductase domain protein.
 
    0.853
FAES_3797
Protein of unknown function DUF1080.
       0.773
FAES_1645
Oxidoreductase domain protein.
  
    0.689
FAES_1280
Oxidoreductase domain protein.
  
    0.656
FAES_1761
Xylose isomerase domain protein TIM barrel.
 
     0.616
FAES_3795
OmpA/MotB domain protein.
 
     0.572
FAES_1409
Xylose isomerase domain protein TIM barrel.
  
     0.567
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.