STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_4384Short-chain dehydrogenase/reductase SDR. (260 aa)    
Predicted Functional Partners:
FAES_4385
Amidohydrolase 2.
 
 
 0.989
FAES_4382
Protein of unknown function DUF718.
 
  
 0.860
FAES_1141
PfkB domain protein.
  
  0.815
FAES_1421
PfkB domain protein.
  
  0.815
FAES_4778
ROK family protein.
   
 
  0.803
FAES_4386
5-carboxymethyl-2-hydroxymuconateDelta- isomerase.
 
 0.761
fucP3
Glucose/galactose transporter.
 
    0.653
FAES_0944
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.520
acdS
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.456
FAES_0700
Amino acid adenylation domain protein.
 
 
 0.451
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.