STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompA5OmpA-OmpF porin, OOP family. (316 aa)    
Predicted Functional Partners:
yiaD1
OmpA/MotB domain protein.
  
     0.763
FAES_4500
Hypothetical protein.
 
     0.760
oprF3
Outer membrane porin F.
  
     0.747
FAES_4499
Hypothetical protein.
 
     0.699
FAES_0924
OmpA/MotB domain protein.
  
     0.695
FAES_0730
OmpA/MotB domain protein.
 
 
 0.684
FAES_0633
Photosystem I P700 chlorophyll a apoprotein A2 PsaB.
  
    0.667
FAES_4372
Photosystem I P700 chlorophyll a apoprotein A2 PsaB.
  
     0.622
FAES_0748
OmpA/MotB domain protein.
  
 
 0.617
FAES_3879
OmpA/MotB domain protein.
  
     0.617
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.