STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_5239Oxidoreductase domain protein. (463 aa)    
Predicted Functional Partners:
FAES_5238
Hypothetical protein.
       0.545
FAES_5241
RagB/SusD domain protein.
 
     0.531
FAES_5240
TonB-dependent receptor plug.
 
     0.519
FAES_5242
Hypothetical protein.
 
     0.503
FAES_3416
Galactokinase; Belongs to the GHMP kinase family.
 
 
 0.430
FAES_3487
Beta-hexosaminidase.
  
    0.420
FAES_3798
Oxidoreductase domain protein.
  
     0.416
FAES_0163
Hypothetical protein.
  
     0.410
FAES_2334
Coagulation factor 5/8 type domain protein.
  
     0.409
FAES_0508
Oxidoreductase domain protein.
  
     0.408
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.