STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO60199.1Uncharacterized conserved protein, tellurite resistance protein B (TerB) family. (161 aa)    
Predicted Functional Partners:
SDO60220.1
GMP synthase (glutamine-hydrolysing).
 
     0.835
SDO60176.1
HemY protein.
 
     0.639
SDO60160.1
Hypothetical protein.
 
     0.615
SDO60243.1
NAD(P) transhydrogenase.
       0.541
SDN50026.1
Hypothetical protein.
  
     0.463
SDO33261.1
Protein of unknown function.
  
     0.426
SDO60137.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
       0.424
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
       0.420
Your Current Organism:
Aureimonas jatrophae
NCBI taxonomy Id: 1166073
Other names: A. jatrophae, Aurantimonas sp. L7-484, Aureimonas jatrophae Madhaiyan et al. 2013, DSM 25025, KACC 16230, strain L7-484
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