STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF29141.1Phosphonoacetate hydrolase. (72 aa)    
Predicted Functional Partners:
SFF29133.1
3-hydroxybutyryl-CoA dehydrogenase.
       0.737
SFF29120.1
Electron transfer flavoprotein alpha subunit apoprotein.
       0.665
SFF29105.1
Electron transfer flavoprotein beta subunit.
       0.533
Your Current Organism:
Aureimonas phyllosphaerae
NCBI taxonomy Id: 1166078
Other names: A. phyllosphaerae, Aurantimonas sp. L7-456, Aurantimonas sp. L7-479, Aurantimonas sp. L9-753, Aureimonas phyllosphaerae Madhaiyan et al. 2013, DSM 25026, KACC 16231, strain L9-753
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