STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF51297.14-aminobutyrate---pyruvate transaminase. (117 aa)    
Predicted Functional Partners:
SFF27969.1
4-aminobutyrate---pyruvate transaminase.
 
     0.976
SFF40828.1
5-aminolevulinate synthase.
  
 
 0.847
SFF24110.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
   
 
 0.726
SFF39884.1
Short chain enoyl-CoA hydratase.
   
 
 0.726
SFF14462.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
    
 0.711
SFF22638.1
Glutamate synthase (NADH) large subunit.
     
 0.698
SFF50928.1
Acetyltransferase.
     
 0.691
SFF13417.1
Putative glutamine amidotransferase.
 
  
  0.681
asd
Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
  
 0.660
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
 0.623
Your Current Organism:
Aureimonas phyllosphaerae
NCBI taxonomy Id: 1166078
Other names: A. phyllosphaerae, Aurantimonas sp. L7-456, Aurantimonas sp. L7-479, Aurantimonas sp. L9-753, Aureimonas phyllosphaerae Madhaiyan et al. 2013, DSM 25026, KACC 16231, strain L9-753
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