STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGN85162.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (527 aa)    
Predicted Functional Partners:
hycE-2
Hydrogenase 3 large subunit; Formate hydrogenlyase subunit 5; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.999
hycD
Hydrogenase 3 membrane subunit; Formate hydrogenlyase subunit 4; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.988
AGN85160.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
0.980
hyfE
Hydrogenase-4 subunit E; Interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.977
AGN85164.1
Electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released from formate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.972
AGN85165.1
Formate hydrogenlyase subunit 7; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.972
hycE
Hydrogenase 3 large subunit; Formate hydrogenlyase subunit 5; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.967
AGN85448.1
Formate hydrogenlyase subunit 7; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.965
hycD-2
Hydrogenase 3 membrane subunit; Formate hydrogenlyase subunit 4; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.963
AGN85158.1
Hydantoin racemase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
0.961
Your Current Organism:
Enterobacter sp. R4368
NCBI taxonomy Id: 1166130
Other names: E. sp. R4-368, Enterobacter sp. R4-368
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