STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGN87479.12-oxobutyrate oxidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the iron/ascorbate-dependent oxidoreductase family. (342 aa)    
Predicted Functional Partners:
AGN87478.1
Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nlpA lipoprotein family.
  
    0.785
AGN87477.1
ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
    0.752
AGN87476.1
Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.743
rpmJ
50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.521
rpmE2
50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.462
AGN84154.1
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
    0.455
AGN85130.1
Thiosulfate transporter subunit; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.426
AGN87314.1
Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.419
Your Current Organism:
Enterobacter sp. R4368
NCBI taxonomy Id: 1166130
Other names: E. sp. R4-368, Enterobacter sp. R4-368
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.