STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGN87641.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (331 aa)    
Predicted Functional Partners:
AGN87642.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.957
AGN87640.1
ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.950
AGN86442.1
D-ribose transporter subunit RbsB; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.865
araG
Arabinose ABC transporter ATP-binding protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
 0.855
xylG
Xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.849
AGN84872.1
D-ribose transporter ATP binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.842
AGN86781.1
RbsB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.841
AGN88040.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.823
AGN86892.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.811
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.796
Your Current Organism:
Enterobacter sp. R4368
NCBI taxonomy Id: 1166130
Other names: E. sp. R4-368, Enterobacter sp. R4-368
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