STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS05414.1Penicillin-binding protein 1C. (696 aa)    
Predicted Functional Partners:
SFS05421.1
Hypothetical protein.
 
   
 0.947
SFS09325.1
Penicillin-binding protein 2.
  
  
 0.758
SFS11388.1
Cell division protein FtsI (penicillin-binding protein 3).
  
  
 0.701
SFR80979.1
Penicillin-binding protein 1A.
  
  
0.695
SFR80792.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
     
 0.588
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
 
0.562
SFR80581.1
Penicillin-binding protein 1A.
  
  
 
0.544
SFS05308.1
Penicillin-binding protein 1A.
  
  
 
0.542
mrdB
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
   
 0.441
SFR78108.1
Peptidase family M23.
  
     0.426
Your Current Organism:
Sphingomonas jatrophae
NCBI taxonomy Id: 1166337
Other names: DSM 27345, KACC 17593, S. jatrophae, Sphingomonas jatrophae Madhaiyan et al. 2017, Sphingomonas sp. S5-249, strain S5-249
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