STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN43657.1Threonine synthase. (464 aa)    
Predicted Functional Partners:
SEM95926.1
Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
  
 0.946
SEM43516.1
Threonine dehydratase.
  
 
 0.943
SEN17738.1
L-threonine ammonia-lyase.
  
 
 0.943
SEM71395.1
Homoserine dehydrogenase.
 
 0.917
SEM70303.1
L-threonine aldolase.
   
 0.914
SEN53336.1
L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.
   
 0.914
thrB
Homoserine kinase; Belongs to the pseudomonas-type ThrB family.
    
 0.912
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).
    
  0.899
SEN43694.1
23S rRNA (cytosine1962-C5)-methyltransferase; Belongs to the methyltransferase superfamily.
       0.881
SEM88674.1
Hypothetical protein.
  
 0.852
Your Current Organism:
Sphingomonas sp. S6262
NCBI taxonomy Id: 1166340
Other names: S. sp. S6-262, Sphingomonas sp. S6-262
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