STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000759345_01923Unannotated protein. (352 aa)    
Predicted Functional Partners:
GCA_000759345_02593
Unannotated protein.
   
 
 0.937
GCA_000759345_02122
Unannotated protein.
    
  0.851
GCA_000759345_02330
Unannotated protein.
  
 
 0.840
GCA_000759345_02806
Unannotated protein.
    
  0.840
GCA_000759345_00426
Unannotated protein.
    
 0.838
GCA_000759345_00577
Unannotated protein.
    
  0.837
GCA_000759345_02982
Unannotated protein.
   
 0.836
GCA_000759345_01012
Unannotated protein.
  
 
  0.835
GCA_000759345_03231
Unannotated protein.
   
 0.830
GCA_000759345_01061
Unannotated protein.
   
 0.829
Your Current Organism:
Halomonas xinjiangensis
NCBI taxonomy Id: 1166948
Other names: CCTCC AB 208329, H. xinjiangensis, Halomonas xinjiangensis Guan et al. 2010, KCTC 22608, strain TRM 0175
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.