STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_00241Fe-S oxidoreductase; PFAM: 4Fe-4S dicluster domain. (553 aa)    
Predicted Functional Partners:
UWK_00240
Putative sulfite reductase-associated electron transfer protein DsrJ.
 
    0.948
UWK_00242
PFAM: Nitrate reductase gamma subunit.
 
 
 0.947
UWK_00238
PFAM: Polysulphide reductase, NrfD.
 
    0.937
UWK_00239
Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S dicluster domain.
 
  
 0.890
UWK_00243
PFAM: RsbT co-antagonist protein rsbRD N-terminal domain.
 
     0.888
UWK_00448
PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family.
 
 
 
 0.858
UWK_01633
Dissimilatory sulfite reductase alpha subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit.
 
  
 0.821
UWK_01634
Dissimilatory sulfite reductase beta subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit.
 
  
 0.809
UWK_03284
PFAM: Polysulphide reductase, NrfD.
 
    0.786
UWK_02023
PFAM: 4Fe-4S dicluster domain; Adenosine-5'-phosphosulfate reductase beta subunit; TIGRFAM: adenosine phosphosulphate reductase, beta subunit.
  
     0.749
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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