STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_00246Hypothetical protein. (87 aa)    
Predicted Functional Partners:
UWK_00252
PFAM: SAF-like; TIGRFAM: Flp pilus assembly protein CpaB.
  
  
 0.888
UWK_00247
Hypothetical protein; PFAM: Putative Flp pilus-assembly TadE/G-like.
  
  
 0.709
UWK_00254
Flp pilus assembly protein, ATPase CpaF; PFAM: Type II/IV secretion system protein; FHA domain.
  
  
 0.573
UWK_00253
Flp pilus assembly protein, secretin CpaC; PFAM: Bacterial type II and III secretion system protein; Pilus formation protein N terminal region; Belongs to the bacterial secretin family.
  
  
 0.571
UWK_00259
PFAM: TadE-like protein.
  
  
 0.556
UWK_00248
Hypothetical protein.
  
  
 0.555
UWK_00256
Flp pilus assembly protein TadB; PFAM: Type II secretion system (T2SS), protein F; overlaps another CDS with the same product name.
  
  
 0.521
UWK_00255
Flp pilus assembly protein TadB; PFAM: Type II secretion system (T2SS), protein F; overlaps another CDS with the same product name.
  
  
 0.506
UWK_00245
Putative pyrophosphatase.
       0.489
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.