STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_00521Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); overlaps another CDS with the same product name. (141 aa)    
Predicted Functional Partners:
UWK_00524
Arsenite efflux pump ACR3-like permease; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein.
 
  
 0.855
UWK_00522
Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase; overlaps another CDS with the same product name.
       0.773
UWK_01602
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
  
   0.756
nhaA
Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
      0.739
UWK_01660
PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.
    
 0.665
UWK_01974
Polyketide synthase family protein; PFAM: Acyl transferase domain; KR domain; Nitronate monooxygenase; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.592
UWK_01814
Capsular exopolysaccharide biosynthesis protein; PFAM: AAA domain; Chain length determinant protein; G-rich domain on putative tyrosine kinase; TIGRFAM: capsular exopolysaccharide family.
  
 
 0.565
UWK_00523
Hypothetical protein.
       0.561
UWK_00520
PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain.
       0.484
UWK_02344
PFAM: Thioredoxin; TIGRFAM: thioredoxin.
  
 
 0.476
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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