STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_00892PAS domain S-box; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (600 aa)    
Predicted Functional Partners:
UWK_00891
CheY-like receiver and winged-helix DNA-binding domain-containing response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 0.994
UWK_00967
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain; TIGRFAM: PAS domain S-box.
 
 
0.931
UWK_01389
CheY-like receiver and winged-helix DNA-binding domain-containing response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.783
UWK_00532
PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
      0.778
UWK_01119
CheY-like receiver and winged-helix DNA-binding domain-containing response regulator; PFAM: Response regulator receiver domain; Domain of unknown function (DUF4388).
 
 0.767
UWK_00890
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
 
   
 0.765
UWK_01146
Serine phosphatase RsbU, regulator of sigma subunit; PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE).
 
     0.744
UWK_01360
Serine phosphatase RsbU, regulator of sigma subunit; PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE).
   
 0.718
UWK_01067
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phospho-acceptor) domain; fused histidine kinase/response regulator receiver domain.
 
0.676
UWK_01012
Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
 
   
 0.662
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.