STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_00958Hypothetical protein. (215 aa)    
Predicted Functional Partners:
UWK_00959
PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family.
       0.795
UWK_00957
Isopentenyldiphosphate isomerase; PFAM: NUDIX domain.
       0.773
UWK_02336
Hypothetical protein.
  
    0.763
UWK_01141
Hypothetical protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N).
  
     0.750
UWK_02027
Putative adenylylsulfate reductase-associated electron transfer protein QmoC; PFAM: 4Fe-4S dicluster domain.
  
     0.750
UWK_03142
Hypothetical protein.
  
     0.722
UWK_00712
Hypothetical protein.
  
     0.705
UWK_00766
Cupin domain-containing protein; PFAM: Cupin domain.
  
     0.703
UWK_02649
Putative protein-tyrosine phosphatase; PFAM: Dual specificity phosphatase, catalytic domain.
  
     0.694
UWK_01507
Hypothetical protein.
  
     0.691
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.