STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_01347PFAM: SNARE associated Golgi protein. (231 aa)    
Predicted Functional Partners:
UWK_01346
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
     0.993
UWK_00499
Fe-S oxidoreductase; PFAM: Cysteine-rich domain; 4Fe-4S dicluster domain.
      0.877
UWK_01258
PFAM: Protein of unknown function (DUF1499).
 
     0.771
UWK_01762
PFAM: Glycosyl transferase family 2.
 
     0.740
UWK_01763
PFAM: Uncharacterized protein conserved in bacteria (DUF2064).
 
     0.729
UWK_02160
PFAM: Protein of unknown function (DUF3047).
 
     0.584
UWK_01494
PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein.
 
     0.479
UWK_01345
Hypothetical protein.
       0.476
UWK_01344
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
       0.438
msrA-2
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
   
 0.431
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.