STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_01877Glycosyltransferase; PFAM: Glycosyl transferases group 1. (371 aa)    
Predicted Functional Partners:
UWK_01875
PFAM: Glycosyl transferase family 1.
 
     0.954
UWK_01879
PFAM: Glycosyl transferase family 1; Glycosyltransferase family 28 C-terminal domain.
 
     0.954
UWK_01874
Hypothetical protein.
 
     0.950
UWK_01871
ABC-type antimicrobial peptide transport system, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family.
 
     0.886
UWK_01876
Fructose-2,6-bisphosphatase; PFAM: Histidine phosphatase superfamily (branch 1).
 
    0.873
UWK_01878
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
    
0.856
UWK_01873
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: FtsX-like permease family.
 
     0.847
UWK_01872
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
     0.820
UWK_01865
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
  
     0.775
UWK_02544
PFAM: Mechanosensitive ion channel.
  
     0.695
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.