STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_02389ABC-type polysaccharide/polyol phosphate export system, permease component; PFAM: ABC-2 type transporter; TIGRFAM: ABC-2 type transporter, NodJ family. (252 aa)    
Predicted Functional Partners:
UWK_02390
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; TIGRFAM: ATP-binding ABC transporter family nodulation protein NodI.
 
  
 0.988
UWK_01978
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.885
UWK_01994
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: AAA domain.
  
 
 0.885
corA-2
Magnesium Mg(2+) and cobalt Co(2+) transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.773
UWK_02392
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.608
UWK_02388
Hypothetical protein.
       0.594
UWK_01976
Putative glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2.
  
  
 0.568
UWK_01995
Methyltransferase, FkbM family; PFAM: Glycosyltransferase WbsX; Glycosyl transferase family 2; Methyltransferase FkbM domain; TIGRFAM: methyltransferase, FkbM family.
  
  
 0.556
UWK_01792
Hypothetical protein.
  
  
 0.546
UWK_01815
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; TIGRFAM: polysaccharide export protein EpsE.
  
  
 0.546
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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