STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_02405ABC-type polysaccharide/polyol phosphate export system, permease component; PFAM: ABC-2 type transporter. (266 aa)    
Predicted Functional Partners:
UWK_01978
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
 0.994
UWK_01994
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: AAA domain.
 
 0.994
UWK_02406
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.989
UWK_01977
ABC-type polysaccharide/polyol phosphate export system, permease component; PFAM: ABC-2 type transporter.
  
  
 
0.922
UWK_02460
PFAM: Glycosyltransferase like family; Glycosyl transferase family 2.
 
  
 0.731
UWK_01976
Putative glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2.
 
  
 0.712
UWK_01995
Methyltransferase, FkbM family; PFAM: Glycosyltransferase WbsX; Glycosyl transferase family 2; Methyltransferase FkbM domain; TIGRFAM: methyltransferase, FkbM family.
 
  
 0.693
UWK_02407
PFAM: Glycosyl transferase family 2.
 
    0.671
UWK_02404
Putative dehydrogenase; PFAM: Bacterial transferase hexapeptide (six repeats); Oxidoreductase family, NAD-binding Rossmann fold.
     
 0.621
UWK_02483
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
    0.579
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.