STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_02417Spore coat polysaccharide biosynthesis protein, putative glycosyltransferase. (342 aa)    
Predicted Functional Partners:
UWK_02421
N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase.
 
  
 0.931
UWK_02415
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.901
UWK_02414
PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase.
 
   
 0.899
UWK_02416
PFAM: Cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase.
 
   
 0.896
UWK_02427
Sialic acid synthase; PFAM: SAF domain; NeuB family.
 
  
 0.654
UWK_02419
Hypothetical protein.
  
  
 0.630
UWK_03120
Sialic acid synthase; PFAM: SAF domain; NeuB family.
 
  
 0.608
UWK_01767
Glucose-1-phosphate thymidylyltransferase, short form; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
    0.583
UWK_02420
Biotin carboxylase; PFAM: ATP-grasp domain.
       0.552
UWK_02418
Hypothetical protein; PFAM: Sulfotransferase family.
       0.513
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.