STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_02421N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase. (350 aa)    
Predicted Functional Partners:
UWK_02416
PFAM: Cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase.
 
 
 0.991
UWK_02417
Spore coat polysaccharide biosynthesis protein, putative glycosyltransferase.
 
  
 0.931
UWK_03118
CMP-N-acetylneuraminic acid synthetase; PFAM: Cytidylyltransferase.
  
 0.887
UWK_02414
PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase.
 
  
 0.860
UWK_02415
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.826
UWK_02448
CMP-N-acetylneuraminic acid synthetase; PFAM: Cytidylyltransferase.
 
  
 0.824
UWK_02419
Hypothetical protein.
  
  
 0.812
UWK_02420
Biotin carboxylase; PFAM: ATP-grasp domain.
     
 0.803
UWK_02418
Hypothetical protein; PFAM: Sulfotransferase family.
       0.773
UWK_00899
PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family.
    
 0.603
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.