STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_02558ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein. (148 aa)    
Predicted Functional Partners:
UWK_02556
PFAM: Permease; TIGRFAM: conserved hypothetical integral membrane protein.
 
 0.998
UWK_02557
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
 0.997
UWK_02560
ABC-type transport system involved in resistance to organic solvents, auxiliary component; PFAM: Toluene tolerance, Ttg2.
 
 0.994
UWK_02536
PFAM: Permease; TIGRFAM: conserved hypothetical integral membrane protein.
 
 0.990
UWK_02535
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
 0.978
UWK_02559
PFAM: VacJ like lipoprotein.
 
   
 0.945
UWK_00871
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: PilZ domain; STAS domain; TIGRFAM: anti-anti-sigma factor.
  
   0.632
UWK_01144
Anti-anti-sigma factor; PFAM: PilZ domain; STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.632
UWK_01354
PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.632
UWK_01847
Anti-anti-sigma factor; PFAM: PilZ domain; STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.632
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.