STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_02681EAL domain-containing protein; PFAM: EAL domain; FHA domain. (384 aa)    
Predicted Functional Partners:
UWK_01329
PFAM: CBS domain; GGDEF domain; GAF domain; PAS domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
  
 0.938
UWK_02660
PFAM: GGDEF domain; PAS domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 0.902
UWK_00531
PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phospho-acceptor) domain.
  
 
 0.892
UWK_03203
PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 0.879
UWK_01589
PFAM: HD domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 0.876
UWK_02106
PFAM: GGDEF domain; PAS domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
 0.876
UWK_01393
PFAM: GGDEF domain; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 0.872
UWK_00195
PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 0.869
UWK_01399
PFAM: EAL domain; HAMP domain; GGDEF domain; PAS domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
 0.864
UWK_03086
Flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN.
  
 
 0.861
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.