STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_03201PFAM: Universal stress protein family. (166 aa)    
Predicted Functional Partners:
UWK_03425
Arsenite efflux pump ACR3-like permease; PFAM: Sodium Bile acid symporter family.
      0.840
UWK_00422
PFAM: Universal stress protein family.
  
     0.768
UWK_00346
PFAM: Universal stress protein family.
  
     0.757
UWK_02877
Arsenite efflux pump ACR3-like permease; PFAM: Sodium Bile acid symporter family.
      0.697
UWK_03200
Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit; PFAM: 4Fe-4S dicluster domain.
       0.572
UWK_03202
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain; TIGRFAM: PAS domain S-box.
     
 0.513
UWK_03199
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
     
 0.471
UWK_03206
PFAM: CBS domain; Voltage gated chloride channel.
  
    0.400
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.