STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_03260Hypothetical protein. (208 aa)    
Predicted Functional Partners:
UWK_03259
PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
  
  
 0.823
UWK_02125
CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein); PFAM: Putative Fe-S cluster; Domain of unknown function (DUF3786).
  
     0.772
UWK_02625
CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein); PFAM: Putative Fe-S cluster; Domain of unknown function (DUF3786).
  
     0.760
UWK_01757
PFAM: Methylene-tetrahydrofolate reductase C terminal.
 
     0.753
UWK_03162
PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit.
  
     0.749
UWK_03161
PFAM: Putative Fe-S cluster; CO dehydrogenase/acetyl-CoA synthase delta subunit.
  
     0.732
UWK_01140
PFAM: Pterin binding enzyme.
  
     0.721
UWK_03163
PFAM: Methylenetetrahydrofolate reductase; CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit.
  
     0.674
UWK_01635
PFAM: Dissimilatory sulfite reductase D (DsrD).
  
     0.615
UWK_02833
Hypothetical protein; PFAM: YcaO-like family; TPR repeat; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis docking scaffold, SagD family.
 
 
   0.615
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.