STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UWK_03383Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. (309 aa)    
Predicted Functional Partners:
UWK_03381
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; PFAM: Oligosaccharide biosynthesis protein Alg14 like.
 
     0.832
UWK_03380
Hypothetical protein; PFAM: Glycosyltransferase family 28 C-terminal domain.
 
     0.827
UWK_03394
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; CoA-binding domain; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 0.825
UWK_03382
PFAM: Glycosyl transferase family 2.
 
     0.810
UWK_02482
PFAM: Glycosyltransferase like family 2; overlaps another CDS with the same product name.
 
     0.778
UWK_02484
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; CoA-binding domain; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 0.777
UWK_03384
Hypothetical protein; PFAM: O-antigen ligase like membrane protein.
       0.773
UWK_01766
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
  
 0.694
UWK_03386
Acyltransferase family protein; PFAM: Bacterial transferase hexapeptide (six repeats).
 
     0.560
UWK_02460
PFAM: Glycosyltransferase like family; Glycosyl transferase family 2.
 
    0.540
Your Current Organism:
Desulfocapsa sulfexigens
NCBI taxonomy Id: 1167006
Other names: D. sulfexigens DSM 10523, Desulfocapsa sulfexigens DSM 10523, Desulfocapsa sulfexigens SB164P1, Desulfocapsa sulfexigens str. DSM 10523, Desulfocapsa sulfexigens strain DSM 10523
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