STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHW62402.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (191 aa)    
Predicted Functional Partners:
AHW62403.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.752
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.752
ligA
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
       0.594
AHW62404.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.547
AHW62405.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.425
Your Current Organism:
Draconibacterium orientale
NCBI taxonomy Id: 1168034
Other names: Bacteroidetes bacterium FH5, Bacteroidetes bacterium SS4, CICC 10585, D. orientale, DSM 25947, Draconibacterium orientale Du et al. 2014, strain FH5
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