STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI62939.1Helix-turn-helix. (93 aa)    
Predicted Functional Partners:
SHI62980.1
Phage-related protein.
 
 
 0.972
SHI46382.1
Phage derived protein Gp49-like.
 
 
 0.884
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.709
SHJ71942.1
Methionine-gamma-lyase.
  
 
 0.561
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.526
SHJ23653.1
Hypothetical protein.
  
 
 0.471
SHJ55044.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
     
 0.421
Your Current Organism:
Tangfeifania diversioriginum
NCBI taxonomy Id: 1168035
Other names: Bacteroidetes bacterium G22, CICC 10587, DSM 27063, T. diversioriginum, Tangfeifania diversioriginum Liu et al. 2014, strain G22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.