STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378025_00531Unannotated protein. (775 aa)    
Predicted Functional Partners:
GCA_000378025_00532
Unannotated protein.
  
 0.971
GCA_000378025_03813
Unannotated protein.
  
  
 0.886
GCA_000378025_04127
Unannotated protein.
 
  
 0.832
GCA_000378025_03820
Unannotated protein.
  
  
 0.795
GCA_000378025_00530
Unannotated protein.
 
     0.671
GCA_000378025_04126
Unannotated protein.
  
    0.496
GCA_000378025_04124
Unannotated protein.
   
    0.457
GCA_000378025_03774
Unannotated protein.
  
  
0.447
GCA_000378025_04125
Unannotated protein.
   
    0.437
GCA_000378025_00376
Unannotated protein.
 
  
 0.432
Your Current Organism:
Xanthobacteraceae bacterium 501b
NCBI taxonomy Id: 1168059
Other names: X. bacterium 501b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.