STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378025_00655Unannotated protein. (306 aa)    
Predicted Functional Partners:
GCA_000378025_00654
Unannotated protein.
 
     0.589
GCA_000378025_00652
Unannotated protein.
 
     0.567
GCA_000378025_03458
Unannotated protein.
  
     0.561
GCA_000378025_02708
Unannotated protein.
  
     0.496
GCA_000378025_00653
Unannotated protein.
       0.495
GCA_000378025_01697
Unannotated protein.
  
     0.434
GCA_000378025_02568
Unannotated protein.
  
     0.405
GCA_000378025_02707
Unannotated protein.
  
     0.401
Your Current Organism:
Xanthobacteraceae bacterium 501b
NCBI taxonomy Id: 1168059
Other names: X. bacterium 501b
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.