STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378025_02532Unannotated protein. (664 aa)    
Predicted Functional Partners:
GCA_000378025_01306
Unannotated protein.
   
  
 0.476
GCA_000378025_03072
Unannotated protein.
  
  
 0.475
GCA_000378025_00210
Unannotated protein.
      
 0.457
GCA_000378025_04535
Unannotated protein.
      
 0.426
GCA_000378025_00934
Unannotated protein.
  
     0.401
Your Current Organism:
Xanthobacteraceae bacterium 501b
NCBI taxonomy Id: 1168059
Other names: X. bacterium 501b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.