STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378025_04214Unannotated protein. (401 aa)    
Predicted Functional Partners:
GCA_000378025_01817
Unannotated protein.
   
 0.863
GCA_000378025_03650
Unannotated protein.
     
 0.819
GCA_000378025_03702
Unannotated protein.
 
   
  0.768
GCA_000378025_03651
Unannotated protein.
   
 
  0.757
GCA_000378025_02925
Unannotated protein.
   
 
  0.754
GCA_000378025_00394
Unannotated protein.
   
 0.742
GCA_000378025_01004
Unannotated protein.
  
 
 0.738
GCA_000378025_04215
Unannotated protein.
 
     0.682
GCA_000378025_04161
Unannotated protein.
  
 0.680
GCA_000378025_01809
Unannotated protein.
    
  0.645
Your Current Organism:
Xanthobacteraceae bacterium 501b
NCBI taxonomy Id: 1168059
Other names: X. bacterium 501b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.