STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378025_04538Unannotated protein. (194 aa)    
Predicted Functional Partners:
GCA_000378025_04539
Unannotated protein.
 
 
 
 0.962
GCA_000378025_01568
Unannotated protein.
    
 0.821
GCA_000378025_01569
Unannotated protein.
    
 0.791
GCA_000378025_04537
Unannotated protein.
 
    0.755
GCA_000378025_03102
Unannotated protein.
  
   
 0.714
GCA_000378025_02743
Unannotated protein.
  
   
 0.711
GCA_000378025_01538
Unannotated protein.
    
 0.699
GCA_000378025_01201
Unannotated protein.
    
 0.697
GCA_000378025_03907
Unannotated protein.
 
 
 0.667
GCA_000378025_03621
Unannotated protein.
  
   
 0.555
Your Current Organism:
Xanthobacteraceae bacterium 501b
NCBI taxonomy Id: 1168059
Other names: X. bacterium 501b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.