W97_00273 protein (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W97_00273

GOLD domain-containing protein. (275 aa)

Predicted Functional Partners:

W97_07773

0.999

W97_02079

0.993

W97_02240

0.970

W97_04872

0.959

W97_00514

0.887

W97_02130

0.863

W97_00984

0.843

W97_04779

0.838

W97_04134

0.832

W97_00668

0.822

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_00273	W97_00514	R7YGP1	R7YI23	GOLD domain-containing protein.	Uncharacterized protein.	0.887
W97_00273	W97_00668	R7YGP1	R7YHT9	GOLD domain-containing protein.	Protein transporter SEC13; Belongs to the WD repeat SEC13 family.	0.822
W97_00273	W97_00984	R7YGP1	R7YIQ4	GOLD domain-containing protein.	Uncharacterized protein.	0.843
W97_00273	W97_02079	R7YGP1	R7YM03	GOLD domain-containing protein.	GOLD domain-containing protein.	0.993
W97_00273	W97_02130	R7YGP1	R7YLW4	GOLD domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.863
W97_00273	W97_02240	R7YGP1	R7YMG9	GOLD domain-containing protein.	GOLD domain-containing protein.	0.970
W97_00273	W97_04134	R7YGP1	R7YSL7	GOLD domain-containing protein.	Uncharacterized protein.	0.832
W97_00273	W97_04779	R7YGP1	R7YV49	GOLD domain-containing protein.	L-type lectin-like domain-containing protein.	0.838
W97_00273	W97_04872	R7YGP1	R7YUX4	GOLD domain-containing protein.	Uncharacterized protein.	0.959
W97_00273	W97_07773	R7YGP1	R7Z2V3	GOLD domain-containing protein.	Endoplasmic reticulum vesicle protein 25.	0.999
W97_00514	W97_00273	R7YI23	R7YGP1	Uncharacterized protein.	GOLD domain-containing protein.	0.887
W97_00514	W97_00668	R7YI23	R7YHT9	Uncharacterized protein.	Protein transporter SEC13; Belongs to the WD repeat SEC13 family.	0.420
W97_00514	W97_02079	R7YI23	R7YM03	Uncharacterized protein.	GOLD domain-containing protein.	0.860
W97_00514	W97_02130	R7YI23	R7YLW4	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.474
W97_00514	W97_02240	R7YI23	R7YMG9	Uncharacterized protein.	GOLD domain-containing protein.	0.808
W97_00514	W97_04779	R7YI23	R7YV49	Uncharacterized protein.	L-type lectin-like domain-containing protein.	0.523
W97_00514	W97_04872	R7YI23	R7YUX4	Uncharacterized protein.	Uncharacterized protein.	0.808
W97_00514	W97_07773	R7YI23	R7Z2V3	Uncharacterized protein.	Endoplasmic reticulum vesicle protein 25.	0.872
W97_00668	W97_00273	R7YHT9	R7YGP1	Protein transporter SEC13; Belongs to the WD repeat SEC13 family.	GOLD domain-containing protein.	0.822
W97_00668	W97_00514	R7YHT9	R7YI23	Protein transporter SEC13; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.420