STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_00677J domain-containing protein. (238 aa)    
Predicted Functional Partners:
W97_00018
Uncharacterized protein.
 
      0.756
W97_06694
Matrin-type domain-containing protein.
    
   0.715
W97_01940
Uncharacterized protein.
   
  0.661
W97_01299
C2H2-type domain-containing protein.
   
 
  0.638
W97_00773
Cwf21 domain-containing protein.
    
  0.634
W97_01525
Uncharacterized protein.
   
  0.628
W97_05316
PWI domain-containing protein.
   
 
  0.593
W97_00238
V-type H+-transporting ATPase 21kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.
 
      0.546
W97_02584
Uncharacterized protein.
    
  0.511
W97_07512
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
 
      0.501
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.