STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_00885Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
W97_00581
Sas10 domain-containing protein.
   
 0.990
W97_02107
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 0.990
W97_04291
WD_REPEATS_REGION domain-containing protein.
   
 0.990
W97_05275
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.990
W97_00135
Uncharacterized protein.
   
 
 0.989
W97_09083
Uncharacterized protein.
   
 
 0.989
W97_06128
U3 small nucleolar RNA-associated protein 22.
   
 0.985
W97_04446
Uncharacterized protein.
   
 0.982
W97_08962
Uncharacterized protein.
   
 0.977
W97_00678
RNA helicase.
   
 0.976
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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