Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| W97_00379 | W97_00915 | R7YGZ2 | R7YIT5 | Uncharacterized protein. | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | 0.999 |
| W97_00379 | W97_02259 | R7YGZ2 | R7YMA2 | Uncharacterized protein. | DNA excision repair protein ERCC-3. | 0.999 |
| W97_00379 | W97_03714 | R7YGZ2 | R7YRE5 | Uncharacterized protein. | HTH TFE/IIEalpha-type domain-containing protein. | 0.994 |
| W97_00379 | W97_04605 | R7YGZ2 | R7YTW6 | Uncharacterized protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.999 |
| W97_00379 | W97_05907 | R7YGZ2 | R7YYE4 | Uncharacterized protein. | CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. | 0.997 |
| W97_00379 | W97_06278 | R7YGZ2 | R7YYX3 | Uncharacterized protein. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.994 |
| W97_00379 | W97_07245 | R7YGZ2 | R7Z1T6 | Uncharacterized protein. | CDK-activating kinase assembly factor MAT1. | 0.997 |
| W97_00379 | W97_07384 | R7YGZ2 | R7Z150 | Uncharacterized protein. | DNA repair helicase rad15. | 0.999 |
| W97_00379 | W97_07789 | R7YGZ2 | R7Z3N3 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
| W97_00379 | W97_08365 | R7YGZ2 | R7Z4G4 | Uncharacterized protein. | BSD domain-containing protein. | 0.999 |
| W97_00915 | W97_00379 | R7YIT5 | R7YGZ2 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | Uncharacterized protein. | 0.999 |
| W97_00915 | W97_02259 | R7YIT5 | R7YMA2 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | DNA excision repair protein ERCC-3. | 0.999 |
| W97_00915 | W97_03714 | R7YIT5 | R7YRE5 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | HTH TFE/IIEalpha-type domain-containing protein. | 0.995 |
| W97_00915 | W97_04605 | R7YIT5 | R7YTW6 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.999 |
| W97_00915 | W97_05907 | R7YIT5 | R7YYE4 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. | 0.988 |
| W97_00915 | W97_06278 | R7YIT5 | R7YYX3 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.995 |
| W97_00915 | W97_07245 | R7YIT5 | R7Z1T6 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | CDK-activating kinase assembly factor MAT1. | 0.998 |
| W97_00915 | W97_07384 | R7YIT5 | R7Z150 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | DNA repair helicase rad15. | 0.999 |
| W97_00915 | W97_07789 | R7YIT5 | R7Z3N3 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | Uncharacterized protein. | 0.998 |
| W97_00915 | W97_08365 | R7YIT5 | R7Z4G4 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | BSD domain-containing protein. | 0.999 |
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