W97_01060 protein (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W97_01060

Pirin; Belongs to the pirin family. (341 aa)

Predicted Functional Partners:

W97_08470

0.840

W97_01061

0.760

W97_03163

0.608

W97_06144

0.489

W97_00477

0.484

W97_01422

0.462

W97_00279

0.444

W97_01250

0.444

W97_01576

0.444

W97_02409

0.444

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_00279	W97_01060	R7YGQ9	R7YIU3	Aamy domain-containing protein.	Pirin; Belongs to the pirin family.	0.444
W97_00279	W97_01422	R7YGQ9	R7YJV4	Aamy domain-containing protein.	Aamy domain-containing protein.	0.580
W97_00477	W97_01060	R7YHI3	R7YIU3	Uncharacterized protein.	Pirin; Belongs to the pirin family.	0.484
W97_01060	W97_00279	R7YIU3	R7YGQ9	Pirin; Belongs to the pirin family.	Aamy domain-containing protein.	0.444
W97_01060	W97_00477	R7YIU3	R7YHI3	Pirin; Belongs to the pirin family.	Uncharacterized protein.	0.484
W97_01060	W97_01061	R7YIU3	R7YIX7	Pirin; Belongs to the pirin family.	Uncharacterized protein.	0.760
W97_01060	W97_01250	R7YIU3	R7YK81	Pirin; Belongs to the pirin family.	Fe2OG dioxygenase domain-containing protein.	0.444
W97_01060	W97_01422	R7YIU3	R7YJV4	Pirin; Belongs to the pirin family.	Aamy domain-containing protein.	0.462
W97_01060	W97_01576	R7YIU3	R7YKC6	Pirin; Belongs to the pirin family.	Uncharacterized protein.	0.444
W97_01060	W97_02409	R7YIU3	R7YMQ6	Pirin; Belongs to the pirin family.	Aamy domain-containing protein.	0.444
W97_01060	W97_03163	R7YIU3	R7YPT5	Pirin; Belongs to the pirin family.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.608
W97_01060	W97_06144	R7YIU3	R7YYQ0	Pirin; Belongs to the pirin family.	Hit family protein 1.	0.489
W97_01060	W97_08470	R7YIU3	R7Z5M2	Pirin; Belongs to the pirin family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.840
W97_01061	W97_01060	R7YIX7	R7YIU3	Uncharacterized protein.	Pirin; Belongs to the pirin family.	0.760
W97_01061	W97_03163	R7YIX7	R7YPT5	Uncharacterized protein.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.537
W97_01061	W97_06144	R7YIX7	R7YYQ0	Uncharacterized protein.	Hit family protein 1.	0.446
W97_01250	W97_01060	R7YK81	R7YIU3	Fe2OG dioxygenase domain-containing protein.	Pirin; Belongs to the pirin family.	0.444
W97_01250	W97_01422	R7YK81	R7YJV4	Fe2OG dioxygenase domain-containing protein.	Aamy domain-containing protein.	0.501
W97_01422	W97_00279	R7YJV4	R7YGQ9	Aamy domain-containing protein.	Aamy domain-containing protein.	0.580
W97_01422	W97_01060	R7YJV4	R7YIU3	Aamy domain-containing protein.	Pirin; Belongs to the pirin family.	0.462