STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_00970Uncharacterized protein. (480 aa)    
Predicted Functional Partners:
W97_05248
ABC1 domain-containing protein.
 
      0.897
W97_00014
Pre-mRNA-splicing factor syf1.
   
 
 0.508
W97_08972
Uncharacterized protein.
    
 
 0.508
W97_08592
SKIP_SNW domain-containing protein.
    
 
 0.447
W97_01333
Adenosinetriphosphatase.
    
 
 0.446
W97_04010
Rtf2 domain-containing protein.
      
 0.439
W97_00586
Pre-mRNA-splicing factor CLF1.
      
 0.436
W97_08428
Uncharacterized protein.
    
 
 0.421
W97_06682
G-patch domain-containing protein.
    
 
 0.402
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.