STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_01158Beta_elim_lyase domain-containing protein. (391 aa)    
Predicted Functional Partners:
W97_00459
Threonine synthase.
  
 0.923
W97_07070
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.916
W97_08120
Aminotran_5 domain-containing protein.
    
 0.914
W97_01690
Threonine dehydratase.
   
 
 0.907
W97_00009
Aminotran_1_2 domain-containing protein.
  
 
 0.888
W97_04249
PALP domain-containing protein.
   
 
 0.878
W97_09117
Alanine transaminase.
  
 
 0.872
W97_03076
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.870
W97_04439
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.870
W97_07721
N,N-dimethylglycine oxidase.
   
 0.861
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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