STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_0123318S rRNA biogenesis protein RCL1. (407 aa)    
Predicted Functional Partners:
W97_02896
Bms1-type G domain-containing protein.
   
 0.999
W97_01595
BP28CT domain-containing protein.
   
 0.997
W97_03246
Uncharacterized protein.
   
 
 0.997
W97_06997
Utp12 domain-containing protein.
   
 0.997
W97_08962
Uncharacterized protein.
   
 0.997
W97_01744
Uncharacterized protein.
   
 0.996
W97_08632
Periodic tryptophan protein 2.
   
 
 0.996
W97_04291
WD_REPEATS_REGION domain-containing protein.
   
 
 0.995
W97_03231
Brix domain-containing protein.
   
 
 0.994
W97_07811
WD_REPEATS_REGION domain-containing protein.
   
 0.994
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.