W97_01382 protein (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W97_01382

Uncharacterized protein. (1998 aa)

Predicted Functional Partners:

W97_01381

0.849

W97_02548

0.744

W97_03147

0.713

W97_02510

0.641

W97_06984

0.641

W97_08704

0.641

W97_08175

0.623

W97_02454

0.598

W97_01649

0.587

W97_01732

0.568

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_01381	W97_01382	R7YJS0	R7YJW4	EXPERA domain-containing protein.	Uncharacterized protein.	0.849
W97_01382	W97_01381	R7YJW4	R7YJS0	Uncharacterized protein.	EXPERA domain-containing protein.	0.849
W97_01382	W97_01649	R7YJW4	R7YKH4	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.587
W97_01382	W97_01732	R7YJW4	R7YL12	Uncharacterized protein.	Serine/threonine protein kinase.	0.568
W97_01382	W97_02454	R7YJW4	R7YMU7	Uncharacterized protein.	Mitotic spindle assembly checkpoint protein MAD2.	0.598
W97_01382	W97_02510	R7YJW4	R7YN41	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.641
W97_01382	W97_02548	R7YJW4	R7YNT5	Uncharacterized protein.	Peptidase C50 domain-containing protein.	0.744
W97_01382	W97_03147	R7YJW4	R7YQ20	Uncharacterized protein.	BUB protein kinase.	0.713
W97_01382	W97_06984	R7YJW4	R7Z0J9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.641
W97_01382	W97_08175	R7YJW4	R7Z422	Uncharacterized protein.	Calponin-homology (CH) domain-containing protein.	0.623
W97_01382	W97_08704	R7YJW4	R7Z5Z4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.641
W97_01649	W97_01382	R7YKH4	R7YJW4	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.587
W97_01649	W97_02454	R7YKH4	R7YMU7	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Mitotic spindle assembly checkpoint protein MAD2.	0.958
W97_01649	W97_02510	R7YKH4	R7YN41	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	WD_REPEATS_REGION domain-containing protein.	0.712
W97_01649	W97_02548	R7YKH4	R7YNT5	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Peptidase C50 domain-containing protein.	0.924
W97_01649	W97_03147	R7YKH4	R7YQ20	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	BUB protein kinase.	0.949
W97_01649	W97_06984	R7YKH4	R7Z0J9	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	WD_REPEATS_REGION domain-containing protein.	0.712
W97_01649	W97_08175	R7YKH4	R7Z422	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Calponin-homology (CH) domain-containing protein.	0.955
W97_01649	W97_08704	R7YKH4	R7Z5Z4	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	WD_REPEATS_REGION domain-containing protein.	0.712
W97_01732	W97_01382	R7YL12	R7YJW4	Serine/threonine protein kinase.	Uncharacterized protein.	0.568